Transcriptome analysis during ripening of table grape berry cv. Thompson Seedless

Primer Autor
Campos-Vargas, Reinaldo
Co-autores
Balic, Ivan#Vizoso, Paula#Nilo-Poyanco, Ricardo#Sanhueza, Dayan#Olmedo, Patricio#Sepulveda, Pablo#Arriagada, Cesar#Defilippi, Bruno G.#Meneses, Claudio
Título
Transcriptome analysis during ripening of table grape berry cv. Thompson Seedless
Editorial
PUBLIC LIBRARY SCIENCE
Revista
PLOS ONE
Lenguaje
en
Resumen
Ripening is one of the key processes associated with the development of major organoleptic characteristics of the fruit. This process has been extensively characterized in climacteric fruit, in contrast with non-climacteric fruit such as grape, where the process is less understood. With the aim of studying changes in gene expression during ripening of non-climacteric fruit, an Illumina based RNA-Seq transcriptome analysis was performed on four developmental stages, between veraison and harvest, on table grapes berries cv Thompson Seedless. Functional analysis showed a transcriptional increase in genes related with degradation processes of chlorophyll, lipids, macromolecules recycling and nucleosomes organization, accompanied by a decrease in genes related with chloroplasts integrity and amino acid synthesis pathways. It was possible to identify several processes described during leaf senescence, particularly close to harvest. Before this point, the results suggest a high transcriptional activity associated with the regulation of gene expression, cytoskeletal organization and cell wall metabolism, which can be related to growth of berries and firmness loss characteristic to this stage of development. This high metabolic activity could be associated with an increase in the transcription of genes related with glycolysis and respiration, unexpected for a non-climacteric fruit ripening.
Tipo de Recurso
Artículo original
Description
This work was supported by projects Fondecyt 1150492 (RC) and Fondecyt 3150538 (16). Both authors contributed in the conceptualization, formulations, leadership and preparation of the manuscript of this work.
Este trabajo fue financiado por los proyectos Fondecyt 1150492 (RC) y Fondecyt 3150538 (16). Ambos autores contribuyeron a la conceptualización, formulación, dirección y preparación del manuscrito de este trabajo.
doi
10.1371/journal.pone.0190087
Formato Recurso
pdf
Ubicación del archivo
http://dx.doi.org/10.1371/journal.pone.0190087
Categoría OCDE
Multidisciplinary Sciences
Disciplinas de la OCDE
Viticulura
Biología Molecular
Botánica
Id de Web of Science
WOS:000419689600031
Título de la cita (Recomendado-único)
Transcriptome analysis during ripening of table grape berry cv. Thompson Seedless
Identificador del recurso (Mandatado-único)
Artículo original
Versión del recurso (Recomendado-único)
version publicada
Editorial
PUBLIC LIBRARY SCIENCE
Revista/Libro
PLOS ONE
Categoría WOS
Ciencias Multidisciplinarias
ISSN
1932-6203
Idioma
en
Referencia del Financiador (Mandatado si es aplicable-repetible)
ANID FONDECYT 150492#ANID FONDECYT 3150538
ANID FONDECYT 1150492
ANID FONDECYT 3150538
Descripción
This work was supported by projects Fondecyt 1150492 (RC) and Fondecyt 3150538 (16). Both authors contributed in the conceptualization, formulations, leadership and preparation of the manuscript of this work.
Formato
pdf
Tipo de ruta
dorada#verde
Access Rights
acceso abierto
Derechos de acceso
acceso abierto
License
CC BY 4.0
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